BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D12LP1|AL427766
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1076 1381 0.0
3x_Contig726 432 e-121
3x_Contig1464 180 4e-45
3x_Contig837 164 3e-40
3x_Contig1292 124 3e-28
>3x_Contig1076
Length = 4245
Score = 1381 bits (690), Expect = 0.0
Identities = 716/732 (97%), Gaps = 1/732 (0%)
Strand = Plus / Minus
Query: 1 atttcctactaggaattttatttaacagaatgtactaaacctaacattcccggccagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atttcctactaggaattttatttaacagaatgtactaaacctaacattcccggccagtga 673
Query: 61 atattatgatggttattgcaaatacgaaaaaataagaactcctcataggggg-ctcgaac 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 672 atattatgatggttattgcaaatacgaaaaaataagaactcctcataggggggctcgaac 613
Query: 120 ccctgacatttcggttccttgcgakcaatgctttawwtccgaacgctctaccawckswgc 179
|||||||||||||||||||||||| |||||||| | ||||||||||||||| | ||
Sbjct: 612 ccctgacatttcggttccttgcgagcaatgcttaaaagccgaacgctctaccaactgagc 553
Query: 180 taacaaggacgagttctcawgttcctcakagttttggaagtattttatacttgatgttga 239
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 552 taacaaggacgagttctcaagttcctcagagttttggaagtattttatacttgatgttga 493
Query: 240 agttttagttgaataccgttttccgtaccttatccgctcttgcctatatcaaccagagat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agttttagttgaataccgttttccgtaccttatccgctcttgcctatatcaaccagagat 433
Query: 300 acgctaataatgagagaggattgtgagcyattcgcaaacggttatattgcatttgtgact 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 432 acgctaataatgagagaggattgtgagctattcgcaaacggttatattgcatttgtgact 373
Query: 360 atgtacatgtaattaagacccatattttaaagagagccaacagtctatttatgattggma 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 372 atgtacatgtaattaagacccatattttaaagagagccaacagtctatttatgattggaa 313
Query: 420 gtactggtatactcctattgtgtggagaacaatctgttgttaaccgcagaccagttcaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtactggtatactcctattgtgtggagaacaatctgttgttaaccgcagaccagttcaag 253
Query: 480 ttatctaaacacttccttacgtaagtggatctgcccttaataccgtaatcattcaagtat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttatctaaacacttccttacgtaagtggatctgcccttaataccgtaatcattcaagtat 193
Query: 540 gaatggtcccacaaactgatcgcmatcaaaggcattgtccaatctttaacgtctgcmttt 599
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 192 gaatggtcccacaaactgatcgcaatcaaaggcattgtccaatctttaacgtctgcattt 133
Query: 600 gcggcaagtagatctctcatcgttacaaactgttccatttcttctaaggatagagcactg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcggcaagtagatctctcatcgttacaaactgttccatttcttctaaggatagagcactg 73
Query: 660 ttcaaatcgaaagattggtttctagcaaagtagtatggagtaccattattttgaactgtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttcaaatcgaaagattggtttctagcaaagtagtatggagtaccattattttgaactgtt 13
Query: 720 aggatgtgaagt 731
||||||||||||
Sbjct: 12 aggatgtgaagt 1
>3x_Contig726
Length = 2931
Score = 432 bits (216), Expect = e-121
Identities = 238/242 (98%), Gaps = 3/242 (1%)
Strand = Plus / Minus
Query: 732 tccttggcatcattttccacaaggaatagccatccttgacctaacacatcttcttctgca 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2919 tccttggcatcattttccacaaggaatagccatccttgacctaacacatcttcttctgca 2860
Query: 792 tgtctaaccatttcatccttaaaagcatcccaagtcattgaatattgtgattctagcttc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2859 tgtctaaccatttcatccttaaaagcatcccaagtcattgaatattgtgattctagcttc 2800
Query: 852 tgtagaaactcacgagatggatgtgt-acttgttccataggcaatatgttttctatgaac 910
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2799 tgtagaaactcacgagatggatgtgtaacttgttccataggcaatatgttttctatgaac 2740
Query: 911 aaatggttattgtgcaaag-mctagccaaattgaaaatg-ttgtttggtatgatttcttc 968
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 2739 aaatggttattgtgcaaagcactagccaaattgaaaatgtttgtttggtatgatttcttc 2680
Query: 969 gc 970
||
Sbjct: 2679 gc 2678
>3x_Contig1464
Length = 11693
Score = 180 bits (90), Expect = 4e-45
Identities = 103/112 (91%)
Strand = Plus / Minus
Query: 87 aaaaaataagaactcctcatagggggctcgaacccctgacatttcggttccttgcgakca 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5723 aaaaaataagaactcctcatagggggctcgaacccctgacatttcggttccttgcgagca 5664
Query: 147 atgctttawwtccgaacgctctaccawckswgctaacaaggacgagttctca 198
|||||| | ||||||||||||||| | |||||||||||||||||||||
Sbjct: 5663 atgcttaaaagccgaacgctctaccaactgagctaacaaggacgagttctca 5612
>3x_Contig837
Length = 3290
Score = 164 bits (82), Expect = 3e-40
Identities = 95/104 (91%)
Strand = Plus / Plus
Query: 93 taagaactcctcatagggggctcgaacccctgacatttcggttccttgcgakcaatgctt 152
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2082 taagaactcctcatagggggctcgaacccctgacatttcggttccttgcgagcaatgctt 2141
Query: 153 tawwtccgaacgctctaccawckswgctaacaaggacgagttct 196
| ||||||||||||||| | |||||||||||||||||||
Sbjct: 2142 aaaagccgaacgctctaccaactgagctaacaaggacgagttct 2185
>3x_Contig1292
Length = 8594
Score = 124 bits (62), Expect = 3e-28
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 98 actcctcatagggggctcgaacccctgacatttcggttccttgcgakcaatgctttawwt 157
|||||||||||||||||||||||||||||||||||||||||||| | | ||||| |
Sbjct: 1912 actcctcatagggggctcgaacccctgacatttcggttccttgcaagcggtgcttaaaag 1853
Query: 158 ccgaacgctctaccawckswgctaacaaggacgagt 193
||||||||||||||| | ||||||||||||||||
Sbjct: 1852 ccgaacgctctaccaactgagctaacaaggacgagt 1817
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6267
Number of Sequences: 1807
Number of extensions: 6267
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 5
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)